Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860809.1_cds_XP_016514740.1_27160
CDS Infomation

[gene=LOC107831485] [db_xref=GeneID:107831485] [protein=ubiquitin domain-containing protein DSK2b-like] [protein_id=XP_016514740.1] [location=complement(join(33585..33733,33819..33908,34624..34649,34974..35032,36290..36403,36524..36753,37409..38173,39487..39739))] [gbkey=CDS]
Sequence

ATGGGCGGCGGTGATACTAGTGCTGCGGCGAAAGAGGATAACGCTAATAATGCCACCGGC
GGCGATCAAAAAGTTGTTACGATTAACGTCCGATGTTCCAACGGCTCAAAATTCTCCGTT
CAGGTGACTCTAGAATCCAGTGTTGGAACCTTCAAGTCCACCCTTGCTCAGCACTCCGAC
ATTCCTGCCGAGCAGCAGAGATTGATCTATAAAGGCCGGATCTTAAAGGACGAACAAACC
CTAGAAAGCTACGGTCTTGAGGCAGATCACACTGTTCATTTAGTTCGAGGTTTTGCTCCA
GCTGCTTCTGCTAATACTGCAAGTGCAACCAATACTGGAAATCCAAATACTAATCAGAAT
GCACCCCCTGATGCCGCCCCAAATGTAGGCGGACCATTTGCTGGATCAGGCCTTGGGGCT
TCACTGTTTCCTGGTCTTGGAAGTGGCGGCGGCGGCGGTGGTTTATTTGGAGCTGGCCTT
CCTGATTTTGAGCAGGTCCAGCAGCAGTTGACTCAAAACCCCAACATGATGAGAGATATC
CTGAACATGCCTCTCGTTCAGAATATGATGAATAACCCAGAAATCATCCGTAACATGATC
ATGAACAATCCTCAAATGCGAGAGATCATGGATCGTAATCCAGAGCTTGCTCACGTACTC
AATGATCCTGCTACTCTTCGCCAGACAATGGAGGCTGCACGGAACCCTGAGCTTATGCGT
GAGATGATGCGCAATACTGACAGGGCAATGAGCAATATTGAATCTTCTCCCGAGGGATTT
AACATGCTGAGGCGCATGTATGAAAATGTCCAAGAGCCTTTCCTAAATGCAACAACTATG
GCTGGAGATGCAAGAAATGATGTGGGCTCGAACCCGTTTGCAGCTCTTTTGGGAGCCCAG
GGTGCGGGGCAAGGCAGAGACCAGTCTACAAATCCTCCAACTACTGGTTCTGAGACCACT
GCTAACACACCTGCTCCAAATACCAATCCACTTCCTAATCCTTGGGCTTCTGCTGGCACT
GGAGCTGGCCAAACTAATACCACTGCTAGGTCAAATGCTGCTGGGGAAACTAGGGCACCA
CCACCGCCTGCTGGCTTAGGTGGGCTTGCTCTCCCAGATCTTGAGCGAATGCTGGGTGGC
ATGCAAGGTGGTATGCCAGATGCTGCTTCACTAAATCAGATGATGCAGAACCCAGCCGTC
TCGCAGATGATGCAGTCTCTGCTCTCAAATCCTCAATACATGAACCAGATTCTTGGGCTC
AACCCACAGCTAAGGAACATGCTTGATTCCAACTCCCAGCTACGAGAAATGATGCAAAAC
CCTGAATTTATTCGGCAGTTGACTTCGCCTGAAACAATGCAGCAACTTATGACTTTCCAG
CAAGGGCTTTTGTCTCAACTTGGTCGACAACCAACGAACCAACCGGGTCAGAATGCTGGA
GGTGCAGCCCTCGACAACATGGGAATGGAAATGCTGATGAACATGTTTGGAGGGCTTGGG
TCGGGAGGTTTGGGTGGTGTCCCCAACAGATCCAATGTGCCTCCGGAGGAATTATATGCC
ACTCAACTCGCGCAGTTACAAGATATGGGTTTCTTTGACACTCAAGAAAATATCAGGGCA
TTGGTTGCCACTGCGGGCAATGTTCATGCTGCAGTAGAGAGACTTCTTGGAAATCTTGGA
CAGTAA

Peptide Sequence

PEP ID

XP_016514740.1
PEP Infomation

PREDICTED: ubiquitin domain-containing protein DSK2b-like [Nicotiana tabacum]
Sequence

MGGGDTSAAAKEDNANNATGGDQKVVTINVRCSNGSKFSVQVTLESSVGTFKSTLAQHSD
IPAEQQRLIYKGRILKDEQTLESYGLEADHTVHLVRGFAPAASANTASATNTGNPNTNQN
APPDAAPNVGGPFAGSGLGASLFPGLGSGGGGGGLFGAGLPDFEQVQQQLTQNPNMMRDI
LNMPLVQNMMNNPEIIRNMIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPELMR
EMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDARNDVGSNPFAALLGAQ
GAGQGRDQSTNPPTTGSETTANTPAPNTNPLPNPWASAGTGAGQTNTTARSNAAGETRAP
PPPAGLGGLALPDLERMLGGMQGGMPDAASLNQMMQNPAVSQMMQSLLSNPQYMNQILGL
NPQLRNMLDSNSQLREMMQNPEFIRQLTSPETMQQLMTFQQGLLSQLGRQPTNQPGQNAG
GAALDNMGMEMLMNMFGGLGSGGLGGVPNRSNVPPEELYATQLAQLQDMGFFDTQENIRA
LVATAGNVHAAVERLLGNLGQ

Transcript Sequence

Gene sequence data has not been registered.